Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Gm25287-201ENSMUST00000103846 110 ntBASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Gm22918-201ENSMUST00000103855 110 ntBASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ndc1Q8VCB1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Celf4-206ENSMUST00000224553 1729 ntBASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ndc1Q8VCB1 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ndc1Q8VCB1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ndc1Q8VCB1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ndc1Q8VCB1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ndc1Q8VCB1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ndc1Q8VCB1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Gm43767-201ENSMUST00000198933 381 ntBASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Ndc1Q8VCB1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ndc1Q8VCB1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ndc1Q8VCB1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ndc1Q8VCB1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ndc1Q8VCB1 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.82□□□□□ -0.2
Ndc1Q8VCB1 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.82□□□□□ -0.2
Ndc1Q8VCB1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ndc1Q8VCB1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Ndc1Q8VCB1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ndc1Q8VCB1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ndc1Q8VCB1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ndc1Q8VCB1 Gm2810-201ENSMUST00000118681 990 ntBASIC13.82□□□□□ -0.2
Ndc1Q8VCB1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms