Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 RPSAP43-201ENST00000402237 625 ntBASIC5.46□□□□□ -1.54
SYNE1Q8NF91 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 GPX1P2-201ENST00000429271 606 ntBASIC5.46□□□□□ -1.54
SYNE1Q8NF91 AP001005.1-201ENST00000571755 1248 ntBASIC5.46□□□□□ -1.54
SYNE1Q8NF91 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC5.46□□□□□ -1.54
SYNE1Q8NF91 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 COX10-202ENST00000429152 875 ntTSL 2 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 AC027796.2-201ENST00000575326 344 ntBASIC5.45□□□□□ -1.54
SYNE1Q8NF91 AC010327.4-202ENST00000591484 748 ntBASIC5.45□□□□□ -1.54
SYNE1Q8NF91 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 HOTTIP_1.1-201ENST00000620415 57 ntBASIC5.45□□□□□ -1.54
SYNE1Q8NF91 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 TNXA-203ENST00000507684 2038 ntBASIC5.45□□□□□ -1.54
SYNE1Q8NF91 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 AC139887.3-201ENST00000568585 713 ntBASIC5.45□□□□□ -1.54
SYNE1Q8NF91 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 AC064862.7-201ENST00000604520 867 ntBASIC5.45□□□□□ -1.54
SYNE1Q8NF91 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 FABP5-202ENST00000396359 986 ntTSL 5 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 RBSN-204ENST00000449050 903 ntTSL 2 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 RFPL4AP1-201ENST00000530883 850 ntBASIC5.45□□□□□ -1.54
SYNE1Q8NF91 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 NKAPP1-205ENST00000585790 367 ntBASIC5.45□□□□□ -1.54
SYNE1Q8NF91 AC005332.7-201ENST00000614046 2005 ntBASIC5.45□□□□□ -1.54
SYNE1Q8NF91 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 MYB-242ENST00000618728 3545 ntTSL 5 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 MIR149-201ENST00000384879 89 ntBASIC5.45□□□□□ -1.54
SYNE1Q8NF91 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 AC064836.3-201ENST00000607928 673 ntBASIC5.45□□□□□ -1.54
SYNE1Q8NF91 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SYNE1Q8NF91 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms