Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 NAPSB-206ENST00000562112 1266 ntBASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 AC024243.1-201ENST00000609234 778 ntBASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 AC106886.4-201ENST00000623557 2502 ntBASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 AC128688.1-201ENST00000487626 519 ntBASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 FAM87A-204ENST00000613235 858 ntBASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
PTCHD4Q6ZW05 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 ECEL1P2-202ENST00000465689 757 ntBASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 AC116407.2-201ENST00000613639 860 ntBASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 LINC01451-201ENST00000623792 534 ntBASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD4Q6ZW05 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms