Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-3Q5R1C3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3-3Q5R1C3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3-3Q5R1C3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3-3Q5R1C3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-3Q5R1C3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms