Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shc1P98083 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.2□□□□□ -0.3
Shc1P98083 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.2□□□□□ -0.3
Shc1P98083 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.2□□□□□ -0.3
Shc1P98083 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.2□□□□□ -0.3
Shc1P98083 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.2□□□□□ -0.3
Shc1P98083 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.2□□□□□ -0.3
Shc1P98083 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.2□□□□□ -0.3
Shc1P98083 Chchd1-203ENSMUST00000224633 557 ntBASIC13.2□□□□□ -0.3
Shc1P98083 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shc1P98083 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shc1P98083 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shc1P98083 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shc1P98083 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shc1P98083 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shc1P98083 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shc1P98083 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Shc1P98083 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Shc1P98083 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shc1P98083 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Shc1P98083 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shc1P98083 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shc1P98083 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shc1P98083 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Shc1P98083 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shc1P98083 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shc1P98083 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shc1P98083 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shc1P98083 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.2□□□□□ -0.3
Shc1P98083 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Shc1P98083 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.19□□□□□ -0.3
Shc1P98083 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Shc1P98083 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.19□□□□□ -0.3
Shc1P98083 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Shc1P98083 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Shc1P98083 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Shc1P98083 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Shc1P98083 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Carlr-201ENSMUST00000181515 2574 ntBASIC13.19□□□□□ -0.3
Shc1P98083 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.19□□□□□ -0.3
Shc1P98083 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.19□□□□□ -0.3
Shc1P98083 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.19□□□□□ -0.3
Shc1P98083 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.19□□□□□ -0.3
Shc1P98083 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.19□□□□□ -0.3
Shc1P98083 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.19□□□□□ -0.3
Shc1P98083 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Shc1P98083 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Shc1P98083 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Shc1P98083 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shc1P98083 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Gm13464-201ENSMUST00000119418 935 ntBASIC13.18□□□□□ -0.3
Shc1P98083 Mir1895-201ENSMUST00000122615 79 ntBASIC13.18□□□□□ -0.3
Shc1P98083 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.18□□□□□ -0.3
Shc1P98083 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Shc1P98083 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Shc1P98083 Gm5867-201ENSMUST00000063197 592 ntBASIC13.18□□□□□ -0.3
Shc1P98083 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Shc1P98083 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Shc1P98083 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shc1P98083 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms