Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MYLKP1-201ENST00000509077 1580 ntBASIC15.47■□□□□ 0.07
SEC61A1P61619 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 LINC01311-201ENST00000565162 1445 ntBASIC15.47■□□□□ 0.07
SEC61A1P61619 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SEC61A1P61619 AL121956.5-201ENST00000625261 221 ntBASIC15.47■□□□□ 0.07
SEC61A1P61619 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SEC61A1P61619 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.47■□□□□ 0.07
SEC61A1P61619 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.47■□□□□ 0.07
SEC61A1P61619 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
SEC61A1P61619 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.46■□□□□ 0.07
SEC61A1P61619 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SEC61A1P61619 AC005332.1-201ENST00000577698 1310 ntBASIC15.46■□□□□ 0.07
SEC61A1P61619 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.46■□□□□ 0.07
SEC61A1P61619 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
SEC61A1P61619 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SEC61A1P61619 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.46■□□□□ 0.07
SEC61A1P61619 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SEC61A1P61619 MIR564-202ENST00000385049 94 ntBASIC15.46■□□□□ 0.07
SEC61A1P61619 PCED1CP-201ENST00000419887 785 ntBASIC15.46■□□□□ 0.07
SEC61A1P61619 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.46■□□□□ 0.07
SEC61A1P61619 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.46■□□□□ 0.07
SEC61A1P61619 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.46■□□□□ 0.07
SEC61A1P61619 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.46■□□□□ 0.07
SEC61A1P61619 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.46■□□□□ 0.07
SEC61A1P61619 AL157888.1-201ENST00000631930 593 ntBASIC15.46■□□□□ 0.07
SEC61A1P61619 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
SEC61A1P61619 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SEC61A1P61619 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.46■□□□□ 0.07
SEC61A1P61619 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SEC61A1P61619 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SEC61A1P61619 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
SEC61A1P61619 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SEC61A1P61619 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.46■□□□□ 0.07
SEC61A1P61619 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.46■□□□□ 0.06
SEC61A1P61619 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SEC61A1P61619 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.46■□□□□ 0.06
SEC61A1P61619 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
SEC61A1P61619 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SEC61A1P61619 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.45■□□□□ 0.06
SEC61A1P61619 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.45■□□□□ 0.06
SEC61A1P61619 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.45■□□□□ 0.06
SEC61A1P61619 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SEC61A1P61619 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SEC61A1P61619 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SEC61A1P61619 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
SEC61A1P61619 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SEC61A1P61619 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SEC61A1P61619 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SEC61A1P61619 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SEC61A1P61619 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SEC61A1P61619 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SEC61A1P61619 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SEC61A1P61619 UBALD1-205ENST00000590891 2641 ntBASIC15.45■□□□□ 0.06
SEC61A1P61619 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.45■□□□□ 0.06
SEC61A1P61619 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SEC61A1P61619 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SEC61A1P61619 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SEC61A1P61619 SPDYE13P-201ENST00000445314 798 ntBASIC15.45■□□□□ 0.06
SEC61A1P61619 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.45■□□□□ 0.06
SEC61A1P61619 AC034232.1-201ENST00000506026 1064 ntBASIC15.45■□□□□ 0.06
SEC61A1P61619 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.45■□□□□ 0.06
SEC61A1P61619 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
SEC61A1P61619 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.45■□□□□ 0.06
SEC61A1P61619 ZNF444P1-201ENST00000559497 298 ntBASIC15.45■□□□□ 0.06
SEC61A1P61619 REXO1L9P-201ENST00000604264 2108 ntBASIC15.45■□□□□ 0.06
SEC61A1P61619 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SEC61A1P61619 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SEC61A1P61619 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SEC61A1P61619 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SEC61A1P61619 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SEC61A1P61619 PCDH8P1-201ENST00000428983 2773 ntBASIC15.45■□□□□ 0.06
SEC61A1P61619 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SEC61A1P61619 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SEC61A1P61619 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SEC61A1P61619 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
SEC61A1P61619 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.44■□□□□ 0.06
SEC61A1P61619 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.44■□□□□ 0.06
SEC61A1P61619 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SEC61A1P61619 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.44■□□□□ 0.06
SEC61A1P61619 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
SEC61A1P61619 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.44■□□□□ 0.06
SEC61A1P61619 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.44■□□□□ 0.06
SEC61A1P61619 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms