Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD74P04233 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CD74P04233 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD74P04233 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD74P04233 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD74P04233 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.83□□□□□ -0.04
CD74P04233 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.83□□□□□ -0.04
CD74P04233 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.83□□□□□ -0.04
CD74P04233 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CD74P04233 LINC02199-201ENST00000506655 2702 ntBASIC14.83□□□□□ -0.04
CD74P04233 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CD74P04233 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CD74P04233 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD74P04233 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CD74P04233 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CD74P04233 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CD74P04233 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.83□□□□□ -0.04
CD74P04233 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CD74P04233 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD74P04233 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD74P04233 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD74P04233 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.82□□□□□ -0.04
CD74P04233 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CD74P04233 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD74P04233 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.82□□□□□ -0.04
CD74P04233 BX276092.7-203ENST00000637198 1536 ntBASIC14.82□□□□□ -0.04
CD74P04233 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.82□□□□□ -0.04
CD74P04233 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.82□□□□□ -0.04
CD74P04233 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.82□□□□□ -0.04
CD74P04233 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.82□□□□□ -0.04
CD74P04233 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD74P04233 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD74P04233 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.82□□□□□ -0.04
CD74P04233 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD74P04233 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.82□□□□□ -0.04
CD74P04233 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.82□□□□□ -0.04
CD74P04233 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD74P04233 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD74P04233 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD74P04233 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.82□□□□□ -0.04
CD74P04233 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD74P04233 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.82□□□□□ -0.04
CD74P04233 SLC25A1P3-201ENST00000395415 828 ntBASIC14.82□□□□□ -0.04
CD74P04233 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.82□□□□□ -0.04
CD74P04233 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.82□□□□□ -0.04
CD74P04233 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.82□□□□□ -0.04
CD74P04233 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.82□□□□□ -0.04
CD74P04233 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CD74P04233 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
CD74P04233 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD74P04233 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.82□□□□□ -0.04
CD74P04233 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD74P04233 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD74P04233 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.82□□□□□ -0.04
CD74P04233 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD74P04233 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.82□□□□□ -0.04
CD74P04233 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD74P04233 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD74P04233 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CD74P04233 RNF216P1-203ENST00000404404 2427 ntBASIC14.82□□□□□ -0.04
CD74P04233 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD74P04233 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD74P04233 AC092068.3-201ENST00000587894 2016 ntBASIC14.82□□□□□ -0.04
CD74P04233 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CD74P04233 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.81□□□□□ -0.04
CD74P04233 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CD74P04233 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.81□□□□□ -0.04
CD74P04233 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.81□□□□□ -0.04
CD74P04233 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.81□□□□□ -0.04
CD74P04233 ESRRAP1-201ENST00000400596 1257 ntBASIC14.81□□□□□ -0.04
CD74P04233 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.81□□□□□ -0.04
CD74P04233 AC113404.2-201ENST00000507884 177 ntBASIC14.81□□□□□ -0.04
CD74P04233 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.81□□□□□ -0.04
CD74P04233 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.81□□□□□ -0.04
CD74P04233 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.81□□□□□ -0.04
CD74P04233 AL353719.1-201ENST00000566847 864 ntBASIC14.81□□□□□ -0.04
CD74P04233 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 AC073648.6-201ENST00000641589 218 ntBASIC14.81□□□□□ -0.04
CD74P04233 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.81□□□□□ -0.04
CD74P04233 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.81□□□□□ -0.04
CD74P04233 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD74P04233 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.81□□□□□ -0.04
CD74P04233 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms