Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Cxcl13O55038 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cxcl13O55038 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cxcl13O55038 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.39□□□□□ -0.43
Cxcl13O55038 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.39□□□□□ -0.43
Cxcl13O55038 Gm12428-201ENSMUST00000119844 727 ntBASIC12.39□□□□□ -0.43
Cxcl13O55038 Gm6222-201ENSMUST00000120787 396 ntBASIC12.39□□□□□ -0.43
Cxcl13O55038 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.39□□□□□ -0.43
Cxcl13O55038 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Mir7684-201ENSMUST00000183858 60 ntBASIC12.39□□□□□ -0.43
Cxcl13O55038 Gm27680-201ENSMUST00000184192 160 ntBASIC12.39□□□□□ -0.43
Cxcl13O55038 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.39□□□□□ -0.43
Cxcl13O55038 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Gm44344-201ENSMUST00000200287 129 ntBASIC12.39□□□□□ -0.43
Cxcl13O55038 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.39□□□□□ -0.43
Cxcl13O55038 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Cxcl13O55038 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cxcl13O55038 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cxcl13O55038 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.38□□□□□ -0.43
Cxcl13O55038 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cxcl13O55038 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.38□□□□□ -0.43
Cxcl13O55038 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Cxcl13O55038 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.38□□□□□ -0.43
Cxcl13O55038 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cxcl13O55038 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cxcl13O55038 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.38□□□□□ -0.43
Cxcl13O55038 Gm9063-201ENSMUST00000223299 582 ntBASIC12.38□□□□□ -0.43
Cxcl13O55038 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.38□□□□□ -0.43
Cxcl13O55038 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cxcl13O55038 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cxcl13O55038 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cxcl13O55038 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.37□□□□□ -0.43
Cxcl13O55038 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.37□□□□□ -0.43
Cxcl13O55038 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cxcl13O55038 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cxcl13O55038 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Cxcl13O55038 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.37□□□□□ -0.43
Cxcl13O55038 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.37□□□□□ -0.43
Cxcl13O55038 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.37□□□□□ -0.43
Cxcl13O55038 Shd-206ENSMUST00000225145 998 ntBASIC12.37□□□□□ -0.43
Cxcl13O55038 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl13O55038 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms