Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav8-1A0A075B641 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Gm12008-201ENSMUST00000117791 755 ntBASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Gm13337-201ENSMUST00000119183 1594 ntBASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 CT025689.6-201ENSMUST00000224991 1104 ntBASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav8-1A0A075B641 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav8-1A0A075B641 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Trav8-1A0A075B641 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav8-1A0A075B641 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav8-1A0A075B641 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav8-1A0A075B641 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav8-1A0A075B641 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms