Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
GPC6Q9Y625 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.74■□□□□ 0.27
GPC6Q9Y625 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GPC6Q9Y625 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 RCN1P1-201ENST00000400413 996 ntBASIC16.74■□□□□ 0.27
GPC6Q9Y625 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 YBX1P2-201ENST00000489612 999 ntBASIC16.74■□□□□ 0.27
GPC6Q9Y625 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.74■□□□□ 0.27
GPC6Q9Y625 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.74■□□□□ 0.27
GPC6Q9Y625 AC008687.5-201ENST00000593746 558 ntBASIC16.74■□□□□ 0.27
GPC6Q9Y625 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.74■□□□□ 0.27
GPC6Q9Y625 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GPC6Q9Y625 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
GPC6Q9Y625 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
GPC6Q9Y625 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GPC6Q9Y625 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GPC6Q9Y625 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GPC6Q9Y625 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC6Q9Y625 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
GPC6Q9Y625 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
GPC6Q9Y625 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC6Q9Y625 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC6Q9Y625 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GPC6Q9Y625 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GPC6Q9Y625 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC6Q9Y625 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC6Q9Y625 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC6Q9Y625 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
GPC6Q9Y625 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
GPC6Q9Y625 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GPC6Q9Y625 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC6Q9Y625 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC6Q9Y625 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC6Q9Y625 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC6Q9Y625 AC117947.1-201ENST00000427448 529 ntBASIC16.73■□□□□ 0.27
GPC6Q9Y625 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC6Q9Y625 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GPC6Q9Y625 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.73■□□□□ 0.27
GPC6Q9Y625 GCSHP2-201ENST00000560971 527 ntBASIC16.73■□□□□ 0.27
GPC6Q9Y625 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
GPC6Q9Y625 AC139887.4-201ENST00000607877 719 ntBASIC16.73■□□□□ 0.27
GPC6Q9Y625 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
GPC6Q9Y625 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC6Q9Y625 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
GPC6Q9Y625 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC6Q9Y625 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
GPC6Q9Y625 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GPC6Q9Y625 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GPC6Q9Y625 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GPC6Q9Y625 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
GPC6Q9Y625 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
GPC6Q9Y625 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC6Q9Y625 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC6Q9Y625 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC6Q9Y625 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC6Q9Y625 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC6Q9Y625 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GPC6Q9Y625 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GPC6Q9Y625 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GPC6Q9Y625 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC6Q9Y625 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
GPC6Q9Y625 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.72■□□□□ 0.27
GPC6Q9Y625 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.72■□□□□ 0.27
GPC6Q9Y625 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GPC6Q9Y625 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC6Q9Y625 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC6Q9Y625 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
GPC6Q9Y625 LINC00167-201ENST00000530583 1419 ntBASIC16.72■□□□□ 0.27
GPC6Q9Y625 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.72■□□□□ 0.27
GPC6Q9Y625 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC6Q9Y625 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.72■□□□□ 0.27
GPC6Q9Y625 FLJ38576-201ENST00000623820 2459 ntBASIC16.72■□□□□ 0.27
GPC6Q9Y625 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
GPC6Q9Y625 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GPC6Q9Y625 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC6Q9Y625 AC100803.2-201ENST00000562459 1963 ntBASIC16.72■□□□□ 0.27
GPC6Q9Y625 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC6Q9Y625 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GPC6Q9Y625 RNF152P1-201ENST00000397754 604 ntBASIC16.72■□□□□ 0.27
GPC6Q9Y625 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
GPC6Q9Y625 PVRIG2P-201ENST00000435460 978 ntBASIC16.72■□□□□ 0.27
GPC6Q9Y625 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.72■□□□□ 0.27
GPC6Q9Y625 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC6Q9Y625 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
GPC6Q9Y625 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.72■□□□□ 0.27
GPC6Q9Y625 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.72■□□□□ 0.27
GPC6Q9Y625 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms