Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Tmem54Q9D7S1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tmem54Q9D7S1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tmem54Q9D7S1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem54Q9D7S1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem54Q9D7S1 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem54Q9D7S1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem54Q9D7S1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem54Q9D7S1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem54Q9D7S1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem54Q9D7S1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem54Q9D7S1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem54Q9D7S1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tmem54Q9D7S1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem54Q9D7S1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem54Q9D7S1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Gm18737-201ENSMUST00000173594 937 ntBASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Gm18889-201ENSMUST00000174284 929 ntBASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Gm43575-201ENSMUST00000196420 516 ntBASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Chchd1-203ENSMUST00000224633 557 ntBASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem54Q9D7S1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Gm23935-201ENSMUST00000102303 57 ntBASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Gm24270-201ENSMUST00000102326 57 ntBASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Gm24245-201ENSMUST00000157318 57 ntBASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Gm5479-201ENSMUST00000160578 435 ntBASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Olfr286-202ENSMUST00000205305 969 ntBASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem54Q9D7S1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tmem54Q9D7S1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Tmem54Q9D7S1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tmem54Q9D7S1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tmem54Q9D7S1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms