Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SPENQ96T58 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.77■□□□□ 0.11
SPENQ96T58 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SPENQ96T58 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SPENQ96T58 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SPENQ96T58 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.77■□□□□ 0.11
SPENQ96T58 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPENQ96T58 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.76■□□□□ 0.11
SPENQ96T58 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.76■□□□□ 0.11
SPENQ96T58 AC009093.7-201ENST00000623853 1223 ntBASIC15.76■□□□□ 0.11
SPENQ96T58 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.76■□□□□ 0.11
SPENQ96T58 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SPENQ96T58 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.76■□□□□ 0.11
SPENQ96T58 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPENQ96T58 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPENQ96T58 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPENQ96T58 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPENQ96T58 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SPENQ96T58 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
SPENQ96T58 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SPENQ96T58 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPENQ96T58 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
SPENQ96T58 AC236430.1-201ENST00000402231 743 ntBASIC15.76■□□□□ 0.11
SPENQ96T58 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.76■□□□□ 0.11
SPENQ96T58 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPENQ96T58 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.76■□□□□ 0.11
SPENQ96T58 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.76■□□□□ 0.11
SPENQ96T58 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.76■□□□□ 0.11
SPENQ96T58 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPENQ96T58 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.76■□□□□ 0.11
SPENQ96T58 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.76■□□□□ 0.11
SPENQ96T58 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPENQ96T58 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.76■□□□□ 0.11
SPENQ96T58 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SPENQ96T58 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.76■□□□□ 0.11
SPENQ96T58 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SPENQ96T58 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPENQ96T58 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPENQ96T58 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SPENQ96T58 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.75■□□□□ 0.11
SPENQ96T58 AC122714.2-201ENST00000502787 707 ntBASIC15.75■□□□□ 0.11
SPENQ96T58 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPENQ96T58 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.75■□□□□ 0.11
SPENQ96T58 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
SPENQ96T58 WIZP1-201ENST00000531444 2299 ntBASIC15.75■□□□□ 0.11
SPENQ96T58 AC093010.1-201ENST00000473625 1624 ntBASIC15.75■□□□□ 0.11
SPENQ96T58 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SPENQ96T58 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
SPENQ96T58 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPENQ96T58 ACTG1P14-201ENST00000446382 1122 ntBASIC15.75■□□□□ 0.11
SPENQ96T58 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.75■□□□□ 0.11
SPENQ96T58 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.75■□□□□ 0.11
SPENQ96T58 AC068137.2-201ENST00000605408 478 ntBASIC15.75■□□□□ 0.11
SPENQ96T58 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.75■□□□□ 0.11
SPENQ96T58 REXO1L11P-201ENST00000620964 1927 ntBASIC15.75■□□□□ 0.11
SPENQ96T58 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPENQ96T58 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.75■□□□□ 0.11
SPENQ96T58 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SPENQ96T58 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SPENQ96T58 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPENQ96T58 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SPENQ96T58 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
SPENQ96T58 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
SPENQ96T58 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.75■□□□□ 0.11
SPENQ96T58 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPENQ96T58 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SPENQ96T58 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SPENQ96T58 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
SPENQ96T58 SIGLEC30P-201ENST00000455569 941 ntBASIC15.74■□□□□ 0.11
SPENQ96T58 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.74■□□□□ 0.11
SPENQ96T58 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SPENQ96T58 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
SPENQ96T58 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SPENQ96T58 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.74■□□□□ 0.11
SPENQ96T58 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.74■□□□□ 0.11
SPENQ96T58 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.74■□□□□ 0.11
SPENQ96T58 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.74■□□□□ 0.11
SPENQ96T58 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.74■□□□□ 0.11
SPENQ96T58 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.74■□□□□ 0.11
SPENQ96T58 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.74■□□□□ 0.11
SPENQ96T58 AC093677.2-201ENST00000600169 1863 ntBASIC15.74■□□□□ 0.11
SPENQ96T58 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.74■□□□□ 0.11
SPENQ96T58 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SPENQ96T58 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
SPENQ96T58 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.74■□□□□ 0.11
SPENQ96T58 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
SPENQ96T58 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPENQ96T58 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPENQ96T58 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
SPENQ96T58 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SPENQ96T58 AP002414.1-201ENST00000391405 1147 ntBASIC15.74■□□□□ 0.11
SPENQ96T58 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.74■□□□□ 0.11
SPENQ96T58 RPS15P9-201ENST00000494093 319 ntBASIC15.74■□□□□ 0.11
SPENQ96T58 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.74■□□□□ 0.11
SPENQ96T58 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.74■□□□□ 0.11
SPENQ96T58 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPENQ96T58 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPENQ96T58 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.74■□□□□ 0.11
SPENQ96T58 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPENQ96T58 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms