Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Mir5126-201ENSMUST00000175513 77 ntBASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Gm43767-201ENSMUST00000198933 381 ntBASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc40Q8BI79 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc40Q8BI79 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Mir5131-201ENSMUST00000175426 93 ntBASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.35■□□□□ 0.05
Ccdc40Q8BI79 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Gm4899-201ENSMUST00000178708 719 ntBASIC15.34■□□□□ 0.05
Ccdc40Q8BI79 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms