Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nphp3Q7TNH6 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
Nphp3Q7TNH6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.83■□□□□ 0.45
Nphp3Q7TNH6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nphp3Q7TNH6 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.83■□□□□ 0.45
Nphp3Q7TNH6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Nphp3Q7TNH6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nphp3Q7TNH6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nphp3Q7TNH6 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.83■□□□□ 0.44
Nphp3Q7TNH6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.83■□□□□ 0.44
Nphp3Q7TNH6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nphp3Q7TNH6 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.83■□□□□ 0.44
Nphp3Q7TNH6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.83■□□□□ 0.44
Nphp3Q7TNH6 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.83■□□□□ 0.44
Nphp3Q7TNH6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nphp3Q7TNH6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Nphp3Q7TNH6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Nphp3Q7TNH6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nphp3Q7TNH6 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.83■□□□□ 0.44
Nphp3Q7TNH6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nphp3Q7TNH6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nphp3Q7TNH6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nphp3Q7TNH6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nphp3Q7TNH6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Gm18049-201ENSMUST00000208909 581 ntBASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nphp3Q7TNH6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 AA543401-201ENSMUST00000164248 1269 ntBASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Gm45098-201ENSMUST00000207179 657 ntBASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nphp3Q7TNH6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Gm18766-201ENSMUST00000189811 808 ntBASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Gm37230-201ENSMUST00000194491 818 ntBASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nphp3Q7TNH6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms