Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.03■□□□□ -0
Slc6a4Q60857 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.03■□□□□ -0
Slc6a4Q60857 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.03■□□□□ -0
Slc6a4Q60857 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.03■□□□□ -0
Slc6a4Q60857 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a4Q60857 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.03■□□□□ -0
Slc6a4Q60857 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a4Q60857 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a4Q60857 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a4Q60857 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a4Q60857 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a4Q60857 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a4Q60857 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.03■□□□□ -0
Slc6a4Q60857 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.03■□□□□ -0
Slc6a4Q60857 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a4Q60857 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a4Q60857 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a4Q60857 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Slc6a4Q60857 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Slc6a4Q60857 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.02■□□□□ -0
Slc6a4Q60857 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a4Q60857 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Slc6a4Q60857 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.02■□□□□ -0
Slc6a4Q60857 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a4Q60857 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a4Q60857 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a4Q60857 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a4Q60857 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a4Q60857 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a4Q60857 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.02■□□□□ -0
Slc6a4Q60857 Mir7023-201ENSMUST00000185093 64 ntBASIC15.02■□□□□ -0
Slc6a4Q60857 Gm17837-201ENSMUST00000186435 985 ntBASIC15.02■□□□□ -0
Slc6a4Q60857 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.02■□□□□ -0
Slc6a4Q60857 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.02■□□□□ -0
Slc6a4Q60857 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Slc6a4Q60857 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.02■□□□□ -0
Slc6a4Q60857 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Slc6a4Q60857 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Slc6a4Q60857 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.02□□□□□ -0.01
Slc6a4Q60857 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a4Q60857 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a4Q60857 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a4Q60857 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a4Q60857 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a4Q60857 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a4Q60857 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a4Q60857 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a4Q60857 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.02□□□□□ -0.01
Slc6a4Q60857 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a4Q60857 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a4Q60857 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Slc6a4Q60857 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.02□□□□□ -0.01
Slc6a4Q60857 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Slc6a4Q60857 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.01□□□□□ -0.01
Slc6a4Q60857 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.01□□□□□ -0.01
Slc6a4Q60857 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.01□□□□□ -0.01
Slc6a4Q60857 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Gm6888-201ENSMUST00000221983 706 ntBASIC15.01□□□□□ -0.01
Slc6a4Q60857 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Slc6a4Q60857 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15□□□□□ -0.01
Slc6a4Q60857 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a4Q60857 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15□□□□□ -0.01
Slc6a4Q60857 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a4Q60857 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a4Q60857 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a4Q60857 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a4Q60857 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Slc6a4Q60857 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms