Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav6d-4Q5R1I0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Gm8749-201ENSMUST00000117737 331 ntBASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Gm9824-201ENSMUST00000178707 561 ntBASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Mir6956-201ENSMUST00000183598 62 ntBASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6d-4Q5R1I0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Gm9726-201ENSMUST00000180321 678 ntBASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Gm27430-201ENSMUST00000184585 107 ntBASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Gm44333-201ENSMUST00000197168 107 ntBASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Gm45098-201ENSMUST00000207179 657 ntBASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Gm44872-201ENSMUST00000207864 420 ntBASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Gm5779-201ENSMUST00000218467 910 ntBASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6d-4Q5R1I0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6d-4Q5R1I0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6d-4Q5R1I0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6d-4Q5R1I0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6d-4Q5R1I0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6d-4Q5R1I0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6d-4Q5R1I0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6d-4Q5R1I0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav6d-4Q5R1I0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms