Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Tpm2P58774 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm2P58774 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Tpm2P58774 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Tpm2P58774 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.9■□□□□ 0.3
Tpm2P58774 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Tpm2P58774 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Tpm2P58774 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Tpm2P58774 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.9■□□□□ 0.3
Tpm2P58774 Gm12008-201ENSMUST00000117791 755 ntBASIC16.9■□□□□ 0.3
Tpm2P58774 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.9■□□□□ 0.3
Tpm2P58774 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Tpm2P58774 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.9■□□□□ 0.3
Tpm2P58774 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.9■□□□□ 0.3
Tpm2P58774 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Tpm2P58774 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Tpm2P58774 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm2P58774 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Tpm2P58774 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tpm2P58774 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tpm2P58774 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tpm2P58774 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tpm2P58774 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.89■□□□□ 0.29
Tpm2P58774 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Tpm2P58774 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.89■□□□□ 0.29
Tpm2P58774 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.89■□□□□ 0.29
Tpm2P58774 Gm25745-201ENSMUST00000174945 133 ntBASIC16.89■□□□□ 0.29
Tpm2P58774 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.89■□□□□ 0.29
Tpm2P58774 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Tpm2P58774 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Tpm2P58774 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Tpm2P58774 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.89■□□□□ 0.29
Tpm2P58774 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm2P58774 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm2P58774 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm2P58774 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm2P58774 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Tpm2P58774 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm2P58774 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm2P58774 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm2P58774 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm2P58774 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Tpm2P58774 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.88■□□□□ 0.29
Tpm2P58774 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Tpm2P58774 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm2P58774 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Tpm2P58774 Olfr129-201ENSMUST00000122318 993 ntBASIC16.88■□□□□ 0.29
Tpm2P58774 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm2P58774 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.88■□□□□ 0.29
Tpm2P58774 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Tpm2P58774 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.88■□□□□ 0.29
Tpm2P58774 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.88■□□□□ 0.29
Tpm2P58774 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm2P58774 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm2P58774 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.88■□□□□ 0.29
Tpm2P58774 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.88■□□□□ 0.29
Tpm2P58774 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm2P58774 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm2P58774 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms