Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm44346-201ENSMUST00000198851 141 ntBASIC17.46■□□□□ 0.39
Ercc3P49135 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.46■□□□□ 0.39
Ercc3P49135 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.46■□□□□ 0.39
Ercc3P49135 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ercc3P49135 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Ercc3P49135 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ercc3P49135 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ercc3P49135 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ercc3P49135 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ercc3P49135 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ercc3P49135 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ercc3P49135 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Ercc3P49135 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.46■□□□□ 0.38
Ercc3P49135 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.46■□□□□ 0.38
Ercc3P49135 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Ercc3P49135 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ercc3P49135 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Gm6973-201ENSMUST00000117080 721 ntBASIC17.45■□□□□ 0.38
Ercc3P49135 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.45■□□□□ 0.38
Ercc3P49135 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.45■□□□□ 0.38
Ercc3P49135 Gm2756-201ENSMUST00000195851 400 ntBASIC17.45■□□□□ 0.38
Ercc3P49135 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.45■□□□□ 0.38
Ercc3P49135 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Ercc3P49135 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ercc3P49135 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ercc3P49135 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.45■□□□□ 0.38
Ercc3P49135 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ercc3P49135 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ercc3P49135 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ercc3P49135 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ercc3P49135 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.44■□□□□ 0.38
Ercc3P49135 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ercc3P49135 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ercc3P49135 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ercc3P49135 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ercc3P49135 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ercc3P49135 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Ercc3P49135 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ercc3P49135 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ercc3P49135 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.44■□□□□ 0.38
Ercc3P49135 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.44■□□□□ 0.38
Ercc3P49135 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ercc3P49135 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
Ercc3P49135 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ercc3P49135 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ercc3P49135 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Ercc3P49135 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ercc3P49135 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ercc3P49135 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Ercc3P49135 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ercc3P49135 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ercc3P49135 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.43■□□□□ 0.38
Ercc3P49135 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Ercc3P49135 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ercc3P49135 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc3P49135 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc3P49135 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.42■□□□□ 0.38
Ercc3P49135 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms