Protein–RNA interactions for Protein: P29268

Ctgf, Connective tissue growth factor, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtgfP29268 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtgfP29268 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CtgfP29268 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtgfP29268 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtgfP29268 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtgfP29268 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.65□□□□□ -0.22
CtgfP29268 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtgfP29268 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.65□□□□□ -0.22
CtgfP29268 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtgfP29268 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CtgfP29268 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CtgfP29268 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CtgfP29268 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.65□□□□□ -0.22
CtgfP29268 Gm5779-201ENSMUST00000218467 910 ntBASIC13.65□□□□□ -0.22
CtgfP29268 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.65□□□□□ -0.22
CtgfP29268 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtgfP29268 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtgfP29268 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CtgfP29268 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtgfP29268 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.65□□□□□ -0.22
CtgfP29268 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtgfP29268 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtgfP29268 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtgfP29268 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.23
CtgfP29268 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.64□□□□□ -0.23
CtgfP29268 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
CtgfP29268 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.64□□□□□ -0.23
CtgfP29268 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CtgfP29268 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.64□□□□□ -0.23
CtgfP29268 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.64□□□□□ -0.23
CtgfP29268 Gm13616-201ENSMUST00000120600 222 ntBASIC13.64□□□□□ -0.23
CtgfP29268 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.64□□□□□ -0.23
CtgfP29268 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.64□□□□□ -0.23
CtgfP29268 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtgfP29268 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.64□□□□□ -0.23
CtgfP29268 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.64□□□□□ -0.23
CtgfP29268 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.63□□□□□ -0.23
CtgfP29268 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.63□□□□□ -0.23
CtgfP29268 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.63□□□□□ -0.23
CtgfP29268 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.63□□□□□ -0.23
CtgfP29268 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.63□□□□□ -0.23
CtgfP29268 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CtgfP29268 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.63□□□□□ -0.23
CtgfP29268 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.63□□□□□ -0.23
CtgfP29268 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Gm29541-201ENSMUST00000191351 678 ntBASIC13.63□□□□□ -0.23
CtgfP29268 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC13.63□□□□□ -0.23
CtgfP29268 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.63□□□□□ -0.23
CtgfP29268 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.63□□□□□ -0.23
CtgfP29268 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CtgfP29268 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CtgfP29268 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms