Protein–RNA interactions for Protein: P28063

Psmb8, Proteasome subunit beta type-8, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmb8P28063 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.05□□□□□ -0.64
Psmb8P28063 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Psmb8P28063 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.05□□□□□ -0.64
Psmb8P28063 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.05□□□□□ -0.64
Psmb8P28063 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.05□□□□□ -0.64
Psmb8P28063 Gm27397-201ENSMUST00000184997 107 ntBASIC11.05□□□□□ -0.64
Psmb8P28063 Gm37935-201ENSMUST00000192012 982 ntBASIC11.05□□□□□ -0.64
Psmb8P28063 Gm20553-201ENSMUST00000204205 844 ntBASIC11.05□□□□□ -0.64
Psmb8P28063 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.05□□□□□ -0.64
Psmb8P28063 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Psmb8P28063 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Psmb8P28063 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Psmb8P28063 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Psmb8P28063 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Psmb8P28063 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Psmb8P28063 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Gm6973-201ENSMUST00000117080 721 ntBASIC11.04□□□□□ -0.64
Psmb8P28063 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.04□□□□□ -0.64
Psmb8P28063 Rprl2-201ENSMUST00000157150 290 ntBASIC11.04□□□□□ -0.64
Psmb8P28063 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Gm9726-201ENSMUST00000180321 678 ntBASIC11.04□□□□□ -0.64
Psmb8P28063 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.04□□□□□ -0.64
Psmb8P28063 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.04□□□□□ -0.64
Psmb8P28063 Gm18057-201ENSMUST00000208220 503 ntBASIC11.04□□□□□ -0.64
Psmb8P28063 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.04□□□□□ -0.64
Psmb8P28063 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.04□□□□□ -0.64
Psmb8P28063 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.04□□□□□ -0.64
Psmb8P28063 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.04□□□□□ -0.64
Psmb8P28063 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Psmb8P28063 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Psmb8P28063 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.04□□□□□ -0.64
Psmb8P28063 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Psmb8P28063 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Psmb8P28063 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.04□□□□□ -0.64
Psmb8P28063 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Psmb8P28063 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Psmb8P28063 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Psmb8P28063 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Psmb8P28063 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Psmb8P28063 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Psmb8P28063 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Psmb8P28063 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Psmb8P28063 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Psmb8P28063 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Psmb8P28063 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Psmb8P28063 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms