Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLSTN1O94985 AC093677.2-201ENST00000600169 1863 ntBASIC19.56■□□□□ 0.72
CLSTN1O94985 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLSTN1O94985 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLSTN1O94985 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CLSTN1O94985 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLSTN1O94985 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.56■□□□□ 0.72
CLSTN1O94985 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLSTN1O94985 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
CLSTN1O94985 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CLSTN1O94985 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLSTN1O94985 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLSTN1O94985 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.56■□□□□ 0.72
CLSTN1O94985 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.56■□□□□ 0.72
CLSTN1O94985 HLA-F-220ENST00000434407 884 ntBASIC19.56■□□□□ 0.72
CLSTN1O94985 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.56■□□□□ 0.72
CLSTN1O94985 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.56■□□□□ 0.72
CLSTN1O94985 HYMAI.1-201ENST00000620949 238 ntBASIC19.56■□□□□ 0.72
CLSTN1O94985 AL121956.5-201ENST00000625261 221 ntBASIC19.56■□□□□ 0.72
CLSTN1O94985 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CLSTN1O94985 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLSTN1O94985 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.56■□□□□ 0.72
CLSTN1O94985 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLSTN1O94985 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLSTN1O94985 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLSTN1O94985 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLSTN1O94985 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLSTN1O94985 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLSTN1O94985 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.56■□□□□ 0.72
CLSTN1O94985 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLSTN1O94985 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLSTN1O94985 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLSTN1O94985 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CLSTN1O94985 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.56■□□□□ 0.72
CLSTN1O94985 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.55■□□□□ 0.72
CLSTN1O94985 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLSTN1O94985 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLSTN1O94985 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.55■□□□□ 0.72
CLSTN1O94985 Z83836.1-201ENST00000624605 1642 ntBASIC19.55■□□□□ 0.72
CLSTN1O94985 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CLSTN1O94985 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CLSTN1O94985 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLSTN1O94985 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLSTN1O94985 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLSTN1O94985 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLSTN1O94985 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLSTN1O94985 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLSTN1O94985 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLSTN1O94985 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLSTN1O94985 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.55■□□□□ 0.72
CLSTN1O94985 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.55■□□□□ 0.72
CLSTN1O94985 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.55■□□□□ 0.72
CLSTN1O94985 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLSTN1O94985 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.55■□□□□ 0.72
CLSTN1O94985 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.55■□□□□ 0.72
CLSTN1O94985 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLSTN1O94985 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLSTN1O94985 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLSTN1O94985 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLSTN1O94985 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLSTN1O94985 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLSTN1O94985 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLSTN1O94985 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLSTN1O94985 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.54■□□□□ 0.72
CLSTN1O94985 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLSTN1O94985 PCED1CP-201ENST00000419887 785 ntBASIC19.54■□□□□ 0.72
CLSTN1O94985 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLSTN1O94985 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.54■□□□□ 0.72
CLSTN1O94985 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.54■□□□□ 0.72
CLSTN1O94985 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.54■□□□□ 0.72
CLSTN1O94985 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.54■□□□□ 0.72
CLSTN1O94985 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.54■□□□□ 0.72
CLSTN1O94985 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.54■□□□□ 0.72
CLSTN1O94985 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLSTN1O94985 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CLSTN1O94985 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.54■□□□□ 0.72
CLSTN1O94985 IER3-202ENST00000376377 1350 ntBASIC19.54■□□□□ 0.72
CLSTN1O94985 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLSTN1O94985 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.54■□□□□ 0.72
CLSTN1O94985 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLSTN1O94985 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLSTN1O94985 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLSTN1O94985 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLSTN1O94985 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLSTN1O94985 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.53■□□□□ 0.72
CLSTN1O94985 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.53■□□□□ 0.72
CLSTN1O94985 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLSTN1O94985 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLSTN1O94985 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLSTN1O94985 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLSTN1O94985 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CLSTN1O94985 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLSTN1O94985 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CLSTN1O94985 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.53■□□□□ 0.72
CLSTN1O94985 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.53■□□□□ 0.72
CLSTN1O94985 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLSTN1O94985 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLSTN1O94985 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLSTN1O94985 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLSTN1O94985 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms