Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.19□□□□□ -0.3
Cops3O88543 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cops3O88543 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Gm18489-201ENSMUST00000172565 551 ntBASIC13.19□□□□□ -0.3
Cops3O88543 Gm5682-201ENSMUST00000173402 505 ntBASIC13.19□□□□□ -0.3
Cops3O88543 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Cops3O88543 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.19□□□□□ -0.3
Cops3O88543 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.19□□□□□ -0.3
Cops3O88543 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cops3O88543 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.19□□□□□ -0.3
Cops3O88543 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cops3O88543 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Cops3O88543 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Cops3O88543 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cops3O88543 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops3O88543 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cops3O88543 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops3O88543 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops3O88543 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.18□□□□□ -0.3
Cops3O88543 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops3O88543 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
Cops3O88543 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops3O88543 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops3O88543 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops3O88543 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops3O88543 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops3O88543 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops3O88543 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops3O88543 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Cops3O88543 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.18□□□□□ -0.3
Cops3O88543 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.18□□□□□ -0.3
Cops3O88543 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.18□□□□□ -0.3
Cops3O88543 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops3O88543 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops3O88543 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cops3O88543 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.18□□□□□ -0.3
Cops3O88543 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cops3O88543 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops3O88543 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cops3O88543 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cops3O88543 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Cops3O88543 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cops3O88543 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops3O88543 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Cops3O88543 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Cops3O88543 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Cops3O88543 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cops3O88543 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.17□□□□□ -0.3
Cops3O88543 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.17□□□□□ -0.3
Cops3O88543 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.17□□□□□ -0.3
Cops3O88543 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.17□□□□□ -0.3
Cops3O88543 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.17□□□□□ -0.3
Cops3O88543 Gm9682-201ENSMUST00000197505 556 ntBASIC13.17□□□□□ -0.3
Cops3O88543 Gm6089-201ENSMUST00000197666 938 ntBASIC13.17□□□□□ -0.3
Cops3O88543 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.17□□□□□ -0.3
Cops3O88543 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.17□□□□□ -0.3
Cops3O88543 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops3O88543 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms