Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh1Q8CGV4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Gm13823-201ENSMUST00000119930 345 ntBASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Gm17837-201ENSMUST00000186435 985 ntBASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Gm28630-201ENSMUST00000187806 498 ntBASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Olfr286-202ENSMUST00000205305 969 ntBASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.29□□□□□ -0.12
Rdh1Q8CGV4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rdh1Q8CGV4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh1Q8CGV4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh1Q8CGV4 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh1Q8CGV4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh1Q8CGV4 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.12
Rdh1Q8CGV4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh1Q8CGV4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh1Q8CGV4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Rdh1Q8CGV4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh1Q8CGV4 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.27□□□□□ -0.12
Rdh1Q8CGV4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh1Q8CGV4 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh1Q8CGV4 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rdh1Q8CGV4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.27□□□□□ -0.13
Rdh1Q8CGV4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.27□□□□□ -0.13
Rdh1Q8CGV4 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh1Q8CGV4 Gm9182-201ENSMUST00000217829 639 ntBASIC14.27□□□□□ -0.13
Rdh1Q8CGV4 Gm6888-201ENSMUST00000221983 706 ntBASIC14.27□□□□□ -0.13
Rdh1Q8CGV4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh1Q8CGV4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh1Q8CGV4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh1Q8CGV4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh1Q8CGV4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh1Q8CGV4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Rdh1Q8CGV4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh1Q8CGV4 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh1Q8CGV4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.27□□□□□ -0.13
Rdh1Q8CGV4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rdh1Q8CGV4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rdh1Q8CGV4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh1Q8CGV4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh1Q8CGV4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh1Q8CGV4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Rdh1Q8CGV4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh1Q8CGV4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.26□□□□□ -0.13
Rdh1Q8CGV4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh1Q8CGV4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh1Q8CGV4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Rdh1Q8CGV4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Rdh1Q8CGV4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh1Q8CGV4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms