Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smco3Q8BQM7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smco3Q8BQM7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smco3Q8BQM7 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Gm14722-201ENSMUST00000118943 689 ntBASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco3Q8BQM7 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Gm43799-201ENSMUST00000201845 579 ntBASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.13□□□□□ -0.47
Smco3Q8BQM7 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms