Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Gm23547-201ENSMUST00000158210 271 ntBASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Gm6089-201ENSMUST00000197666 938 ntBASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ckap4Q8BMK4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ckap4Q8BMK4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ckap4Q8BMK4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ckap4Q8BMK4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ckap4Q8BMK4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Ckap4Q8BMK4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ckap4Q8BMK4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ckap4Q8BMK4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ckap4Q8BMK4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Ckap4Q8BMK4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ckap4Q8BMK4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Gm11452-201ENSMUST00000122376 690 ntBASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Gm8318-201ENSMUST00000182954 872 ntBASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Gm5864-201ENSMUST00000202263 970 ntBASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Gm18195-201ENSMUST00000207604 706 ntBASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ckap4Q8BMK4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms