Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.39□□□□□ -0.43
Mmp9P41245 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp9P41245 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp9P41245 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Mmp9P41245 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Mmp9P41245 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp9P41245 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Mmp9P41245 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp9P41245 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Mmp9P41245 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp9P41245 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp9P41245 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp9P41245 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp9P41245 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Mmp9P41245 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Mmp9P41245 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.39□□□□□ -0.43
Mmp9P41245 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Mmp9P41245 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.38□□□□□ -0.43
Mmp9P41245 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.38□□□□□ -0.43
Mmp9P41245 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.38□□□□□ -0.43
Mmp9P41245 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.38□□□□□ -0.43
Mmp9P41245 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Gm12008-201ENSMUST00000117791 755 ntBASIC12.38□□□□□ -0.43
Mmp9P41245 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.38□□□□□ -0.43
Mmp9P41245 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Mmp9P41245 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Mmp9P41245 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Mmp9P41245 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Mmp9P41245 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Mmp9P41245 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.37□□□□□ -0.43
Mmp9P41245 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.37□□□□□ -0.43
Mmp9P41245 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Mmp9P41245 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Gm27357-201ENSMUST00000183754 135 ntBASIC12.37□□□□□ -0.43
Mmp9P41245 Gm27742-201ENSMUST00000184667 60 ntBASIC12.37□□□□□ -0.43
Mmp9P41245 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Mmp9P41245 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Mmp9P41245 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Mmp9P41245 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Mmp9P41245 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms