Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
XRCC1P18887 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
XRCC1P18887 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
XRCC1P18887 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
XRCC1P18887 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
XRCC1P18887 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.64■□□□□ 0.41
XRCC1P18887 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC1P18887 AD000864.1-201ENST00000624076 2295 ntBASIC17.64■□□□□ 0.41
XRCC1P18887 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.64■□□□□ 0.41
XRCC1P18887 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
XRCC1P18887 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC1P18887 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC1P18887 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC1P18887 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.64■□□□□ 0.41
XRCC1P18887 TSPY12P-201ENST00000421279 868 ntBASIC17.64■□□□□ 0.41
XRCC1P18887 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC1P18887 VENTXP7-201ENST00000475503 772 ntBASIC17.64■□□□□ 0.41
XRCC1P18887 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.64■□□□□ 0.41
XRCC1P18887 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.64■□□□□ 0.41
XRCC1P18887 AC011840.4-201ENST00000578471 627 ntBASIC17.64■□□□□ 0.41
XRCC1P18887 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.64■□□□□ 0.41
XRCC1P18887 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC1P18887 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC1P18887 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
XRCC1P18887 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC1P18887 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC1P18887 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.64■□□□□ 0.41
XRCC1P18887 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC1P18887 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.64■□□□□ 0.41
XRCC1P18887 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
XRCC1P18887 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.64■□□□□ 0.41
XRCC1P18887 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC1P18887 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.63■□□□□ 0.41
XRCC1P18887 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
XRCC1P18887 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC1P18887 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC1P18887 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.63■□□□□ 0.41
XRCC1P18887 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.63■□□□□ 0.41
XRCC1P18887 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC1P18887 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC1P18887 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC1P18887 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC1P18887 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC1P18887 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
XRCC1P18887 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
XRCC1P18887 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.63■□□□□ 0.41
XRCC1P18887 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.63■□□□□ 0.41
XRCC1P18887 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
XRCC1P18887 AC104819.1-201ENST00000504587 486 ntBASIC17.63■□□□□ 0.41
XRCC1P18887 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.63■□□□□ 0.41
XRCC1P18887 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.63■□□□□ 0.41
XRCC1P18887 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC1P18887 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.63■□□□□ 0.41
XRCC1P18887 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC1P18887 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC1P18887 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.63■□□□□ 0.41
XRCC1P18887 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.63■□□□□ 0.41
XRCC1P18887 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.63■□□□□ 0.41
XRCC1P18887 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC1P18887 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC1P18887 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC1P18887 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC1P18887 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC1P18887 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
XRCC1P18887 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
XRCC1P18887 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
XRCC1P18887 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
XRCC1P18887 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.62■□□□□ 0.41
XRCC1P18887 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
XRCC1P18887 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
XRCC1P18887 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
XRCC1P18887 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.62■□□□□ 0.41
XRCC1P18887 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.62■□□□□ 0.41
XRCC1P18887 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
XRCC1P18887 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
XRCC1P18887 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
XRCC1P18887 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
XRCC1P18887 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
XRCC1P18887 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
XRCC1P18887 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
XRCC1P18887 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.62■□□□□ 0.41
XRCC1P18887 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.62■□□□□ 0.41
XRCC1P18887 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
XRCC1P18887 IGHV3-47-201ENST00000425060 335 ntBASIC17.62■□□□□ 0.41
XRCC1P18887 KRT17P6-201ENST00000453795 1220 ntBASIC17.62■□□□□ 0.41
XRCC1P18887 AC068472.1-201ENST00000474589 881 ntBASIC17.62■□□□□ 0.41
XRCC1P18887 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.62■□□□□ 0.41
XRCC1P18887 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.62■□□□□ 0.41
XRCC1P18887 AC074051.2-201ENST00000565115 352 ntBASIC17.62■□□□□ 0.41
XRCC1P18887 AC009154.2-201ENST00000621177 724 ntBASIC17.62■□□□□ 0.41
XRCC1P18887 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.62■□□□□ 0.41
XRCC1P18887 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
XRCC1P18887 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.62■□□□□ 0.41
XRCC1P18887 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
XRCC1P18887 AC022211.2-201ENST00000585075 2527 ntBASIC17.62■□□□□ 0.41
XRCC1P18887 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
XRCC1P18887 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
XRCC1P18887 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
XRCC1P18887 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
XRCC1P18887 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms