Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC85CA6NKD9 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85CA6NKD9 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC85CA6NKD9 WASH4P-201ENST00000564273 1246 ntBASIC19.37■□□□□ 0.69
CCDC85CA6NKD9 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC85CA6NKD9 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC85CA6NKD9 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CCDC85CA6NKD9 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC85CA6NKD9 AL139099.5-201ENST00000635274 300 ntBASIC19.37■□□□□ 0.69
CCDC85CA6NKD9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC85CA6NKD9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85CA6NKD9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC85CA6NKD9 AC006538.1-201ENST00000567905 1585 ntBASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 MYCLP1-201ENST00000372451 1075 ntBASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 DFFBP1-201ENST00000433250 979 ntBASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CCDC85CA6NKD9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 AL645728.2-201ENST00000641974 660 ntBASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC85CA6NKD9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 AC104989.1-201ENST00000519711 778 ntBASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 AC009407.1-201ENST00000568958 598 ntBASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85CA6NKD9 AL391825.1-201ENST00000457671 1364 ntBASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms