Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb4Q91XZ6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb4Q91XZ6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb4Q91XZ6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb4Q91XZ6 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb4Q91XZ6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb4Q91XZ6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb4Q91XZ6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb4Q91XZ6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb4Q91XZ6 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Gm11764-201ENSMUST00000120221 623 ntBASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Gm5864-201ENSMUST00000202263 970 ntBASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb4Q91XZ6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Gm45167-201ENSMUST00000208007 322 ntBASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Gm7787-201ENSMUST00000216858 688 ntBASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms