Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Gm10060-201ENSMUST00000212002 111 ntBASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm1Q8VC85 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Gm11452-201ENSMUST00000122376 690 ntBASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm1Q8VC85 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm1Q8VC85 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lsm1Q8VC85 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms