Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 GGTLC5P-201ENST00000617623 998 ntBASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 AL033527.4-201ENST00000641026 673 ntBASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 AC009336.1-201ENST00000608941 1553 ntBASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 ESPNP-201ENST00000270691 2015 ntBASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 RN7SL589P-201ENST00000481268 310 ntBASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 AP000842.3-202ENST00000569238 1080 ntBASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 AC026120.1-201ENST00000611536 926 ntBASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 AL138828.2-201ENST00000615812 383 ntBASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 AL359881.2-201ENST00000602973 570 ntBASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 SPDYE12P-201ENST00000618416 771 ntBASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 MIR6799-201ENST00000620297 69 ntBASIC11.79□□□□□ -0.52
ALMS1Q8TCU4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 AL662799.1-202ENST00000614205 422 ntBASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 MIR6080-201ENST00000617359 66 ntBASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
ALMS1Q8TCU4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms