Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3bQ80YF6 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Gm12895-201ENSMUST00000122214 226 ntBASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3bQ80YF6 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Gm18489-201ENSMUST00000172565 551 ntBASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Gm27357-201ENSMUST00000183754 135 ntBASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3bQ80YF6 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3bQ80YF6 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms