Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.46□□□□□ -0.09
Ccdc116Q80X53 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc116Q80X53 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ccdc116Q80X53 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc116Q80X53 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc116Q80X53 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc116Q80X53 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc116Q80X53 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.46□□□□□ -0.1
Ccdc116Q80X53 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc116Q80X53 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Ccdc116Q80X53 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.45□□□□□ -0.1
Ccdc116Q80X53 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Gm16198-201ENSMUST00000118766 670 ntBASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc116Q80X53 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms