Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccbe1Q3MI99 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccbe1Q3MI99 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccbe1Q3MI99 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccbe1Q3MI99 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Gm6659-201ENSMUST00000174752 547 ntBASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccbe1Q3MI99 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccbe1Q3MI99 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccbe1Q3MI99 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms