Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim63Q38HM4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim63Q38HM4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.18□□□□□ -0.46
Trim63Q38HM4 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim63Q38HM4 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.17□□□□□ -0.46
Trim63Q38HM4 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.17□□□□□ -0.46
Trim63Q38HM4 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Gm10138-203ENSMUST00000206952 366 ntBASIC12.17□□□□□ -0.46
Trim63Q38HM4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim63Q38HM4 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms