Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VCPP55072 SDHAP2-201ENST00000455183 2001 ntBASIC18.96■□□□□ 0.63
VCPP55072 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VCPP55072 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VCPP55072 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.96■□□□□ 0.63
VCPP55072 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VCPP55072 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
VCPP55072 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
VCPP55072 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCPP55072 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VCPP55072 AP000997.3-201ENST00000623333 2250 ntBASIC18.95■□□□□ 0.62
VCPP55072 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCPP55072 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCPP55072 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VCPP55072 GNAS-203ENST00000306120 1878 ntBASIC18.95■□□□□ 0.62
VCPP55072 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCPP55072 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.95■□□□□ 0.62
VCPP55072 AC134043.2-201ENST00000624206 2238 ntBASIC18.95■□□□□ 0.62
VCPP55072 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCPP55072 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VCPP55072 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.95■□□□□ 0.62
VCPP55072 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.95■□□□□ 0.62
VCPP55072 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.95■□□□□ 0.62
VCPP55072 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.95■□□□□ 0.62
VCPP55072 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.95■□□□□ 0.62
VCPP55072 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.95■□□□□ 0.62
VCPP55072 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
VCPP55072 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCPP55072 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCPP55072 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.95■□□□□ 0.62
VCPP55072 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCPP55072 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
VCPP55072 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
VCPP55072 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
VCPP55072 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
VCPP55072 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
VCPP55072 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.94■□□□□ 0.62
VCPP55072 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.94■□□□□ 0.62
VCPP55072 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
VCPP55072 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
VCPP55072 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 MIR149-201ENST00000384879 89 ntBASIC18.94■□□□□ 0.62
VCPP55072 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.94■□□□□ 0.62
VCPP55072 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 MINOS1P3-201ENST00000457048 203 ntBASIC18.94■□□□□ 0.62
VCPP55072 SCARNA2-201ENST00000458748 420 ntBASIC18.94■□□□□ 0.62
VCPP55072 RN7SL606P-201ENST00000472779 293 ntBASIC18.94■□□□□ 0.62
VCPP55072 VENTXP7-201ENST00000475503 772 ntBASIC18.94■□□□□ 0.62
VCPP55072 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.94■□□□□ 0.62
VCPP55072 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.94■□□□□ 0.62
VCPP55072 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.94■□□□□ 0.62
VCPP55072 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.94■□□□□ 0.62
VCPP55072 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.94■□□□□ 0.62
VCPP55072 MIR3197-201ENST00000582241 73 ntBASIC18.94■□□□□ 0.62
VCPP55072 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.94■□□□□ 0.62
VCPP55072 AL356488.2-201ENST00000602755 427 ntBASIC18.94■□□□□ 0.62
VCPP55072 AC008608.2-201ENST00000606089 416 ntBASIC18.94■□□□□ 0.62
VCPP55072 AC116407.3-201ENST00000623905 1129 ntBASIC18.94■□□□□ 0.62
VCPP55072 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.94■□□□□ 0.62
VCPP55072 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.94■□□□□ 0.62
VCPP55072 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
VCPP55072 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
VCPP55072 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.94■□□□□ 0.62
VCPP55072 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.94■□□□□ 0.62
VCPP55072 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VCPP55072 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCPP55072 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCPP55072 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCPP55072 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VCPP55072 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCPP55072 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCPP55072 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.93■□□□□ 0.62
VCPP55072 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCPP55072 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCPP55072 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCPP55072 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCPP55072 AC009102.3-201ENST00000623118 1491 ntBASIC18.93■□□□□ 0.62
VCPP55072 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
VCPP55072 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
VCPP55072 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.93■□□□□ 0.62
VCPP55072 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.93■□□□□ 0.62
VCPP55072 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms