Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P04940 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
P04940 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
P04940 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.96□□□□□ -0.5
P04940 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
P04940 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
P04940 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
P04940 Gm12260-201ENSMUST00000122447 411 ntBASIC11.95□□□□□ -0.5
P04940 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
P04940 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
P04940 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.95□□□□□ -0.5
P04940 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Gm9182-201ENSMUST00000217829 639 ntBASIC11.95□□□□□ -0.5
P04940 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
P04940 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
P04940 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
P04940 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.95□□□□□ -0.5
P04940 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
P04940 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P04940 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
P04940 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.94□□□□□ -0.5
P04940 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
P04940 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.94□□□□□ -0.5
P04940 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
P04940 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
P04940 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.94□□□□□ -0.5
P04940 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.94□□□□□ -0.5
P04940 Gm44771-201ENSMUST00000206975 626 ntBASIC11.94□□□□□ -0.5
P04940 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.94□□□□□ -0.5
P04940 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.94□□□□□ -0.5
P04940 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.94□□□□□ -0.5
P04940 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
P04940 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
P04940 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.94□□□□□ -0.5
P04940 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P04940 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04940 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.93□□□□□ -0.5
P04940 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P04940 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04940 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04940 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.93□□□□□ -0.5
P04940 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
P04940 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P04940 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms