Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.99■□□□□ 0.31
PRICKLE3O43900 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE3O43900 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE3O43900 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PRICKLE3O43900 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PRICKLE3O43900 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.99■□□□□ 0.31
PRICKLE3O43900 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PRICKLE3O43900 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE3O43900 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE3O43900 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE3O43900 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE3O43900 AC134043.2-201ENST00000624206 2238 ntBASIC16.98■□□□□ 0.31
PRICKLE3O43900 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE3O43900 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE3O43900 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE3O43900 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE3O43900 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE3O43900 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE3O43900 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 AF238378.1-201ENST00000526806 358 ntBASIC16.98■□□□□ 0.31
PRICKLE3O43900 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 AL691432.3-201ENST00000621860 400 ntBASIC16.98■□□□□ 0.31
PRICKLE3O43900 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE3O43900 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE3O43900 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PRICKLE3O43900 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRICKLE3O43900 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
PRICKLE3O43900 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE3O43900 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE3O43900 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE3O43900 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE3O43900 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE3O43900 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
PRICKLE3O43900 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE3O43900 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE3O43900 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE3O43900 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.97■□□□□ 0.31
PRICKLE3O43900 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.97■□□□□ 0.31
PRICKLE3O43900 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.97■□□□□ 0.31
PRICKLE3O43900 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE3O43900 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.97■□□□□ 0.31
PRICKLE3O43900 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE3O43900 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.97■□□□□ 0.31
PRICKLE3O43900 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.97■□□□□ 0.31
PRICKLE3O43900 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.97■□□□□ 0.31
PRICKLE3O43900 AC109462.3-201ENST00000573934 613 ntBASIC16.97■□□□□ 0.31
PRICKLE3O43900 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE3O43900 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PRICKLE3O43900 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE3O43900 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PRICKLE3O43900 HCG11-201ENST00000411553 5696 ntBASIC16.97■□□□□ 0.31
PRICKLE3O43900 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.97■□□□□ 0.31
PRICKLE3O43900 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PRICKLE3O43900 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PRICKLE3O43900 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PRICKLE3O43900 AL133373.2-201ENST00000623187 2828 ntBASIC16.97■□□□□ 0.31
PRICKLE3O43900 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE3O43900 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PRICKLE3O43900 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE3O43900 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE3O43900 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE3O43900 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.96■□□□□ 0.31
PRICKLE3O43900 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE3O43900 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE3O43900 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.96■□□□□ 0.31
PRICKLE3O43900 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.96■□□□□ 0.31
PRICKLE3O43900 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE3O43900 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE3O43900 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
PRICKLE3O43900 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
PRICKLE3O43900 RBM17P3-201ENST00000417687 1192 ntBASIC16.96■□□□□ 0.31
PRICKLE3O43900 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.96■□□□□ 0.31
PRICKLE3O43900 SAPCD2P3-201ENST00000455031 850 ntBASIC16.96■□□□□ 0.31
PRICKLE3O43900 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.96■□□□□ 0.31
PRICKLE3O43900 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE3O43900 LINC01711-201ENST00000598340 967 ntBASIC16.96■□□□□ 0.31
PRICKLE3O43900 AL355877.3-201ENST00000622820 899 ntBASIC16.96■□□□□ 0.31
PRICKLE3O43900 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.96■□□□□ 0.31
PRICKLE3O43900 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE3O43900 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.96■□□□□ 0.31
PRICKLE3O43900 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE3O43900 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE3O43900 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE3O43900 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms