Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 AC141257.4-201ENST00000634557 245 ntBASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 AC136944.6-201ENST00000634818 245 ntBASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 HLA-J-201ENST00000462773 1622 ntBASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 CROCCP2-202ENST00000412962 2773 ntBASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 TSPY15P-201ENST00000457163 923 ntBASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 AL031432.5-201ENST00000641059 760 ntBASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
POLR2J3Q9H1A7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 LINC00304-203ENST00000565008 1864 ntBASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR2J3Q9H1A7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
POLR2J3Q9H1A7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
POLR2J3Q9H1A7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.39■□□□□ 0.22
POLR2J3Q9H1A7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms