Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Tmem54Q9D7S1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Tmem54Q9D7S1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Tmem54Q9D7S1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Tmem54Q9D7S1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Gm13464-201ENSMUST00000119418 935 ntBASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem54Q9D7S1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Gm8749-201ENSMUST00000117737 331 ntBASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Gm15483-201ENSMUST00000120338 456 ntBASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Gm27494-201ENSMUST00000184735 189 ntBASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tmem54Q9D7S1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tmem54Q9D7S1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tmem54Q9D7S1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tmem54Q9D7S1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Tmem54Q9D7S1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tmem54Q9D7S1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.93□□□□□ -0.34
Tmem54Q9D7S1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tmem54Q9D7S1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tmem54Q9D7S1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tmem54Q9D7S1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tmem54Q9D7S1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms