Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shtn1Q8K2Q9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
Shtn1Q8K2Q9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Gm13829-201ENSMUST00000119600 138 ntBASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shtn1Q8K2Q9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shtn1Q8K2Q9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Gm29310-201ENSMUST00000185468 696 ntBASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Gm21825-201ENSMUST00000185728 696 ntBASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Gm29109-201ENSMUST00000185895 696 ntBASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Gm21896-201ENSMUST00000186520 696 ntBASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Gm21873-201ENSMUST00000186728 696 ntBASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Gm21794-201ENSMUST00000187056 696 ntBASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Gm21880-201ENSMUST00000187275 696 ntBASIC17.34■□□□□ 0.37
Shtn1Q8K2Q9 Gm21826-201ENSMUST00000187451 696 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms