Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.17■□□□□ 0.02
Syn1O88935 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Syn1O88935 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.17■□□□□ 0.02
Syn1O88935 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Syn1O88935 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 Dancr-204ENSMUST00000132389 2347 ntBASIC15.17■□□□□ 0.02
Syn1O88935 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.17■□□□□ 0.02
Syn1O88935 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Syn1O88935 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syn1O88935 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syn1O88935 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Syn1O88935 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syn1O88935 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Syn1O88935 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syn1O88935 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syn1O88935 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Syn1O88935 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Syn1O88935 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syn1O88935 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.16■□□□□ 0.02
Syn1O88935 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Syn1O88935 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Syn1O88935 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Syn1O88935 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.16■□□□□ 0.02
Syn1O88935 Gm42693-201ENSMUST00000196779 631 ntBASIC15.16■□□□□ 0.02
Syn1O88935 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.16■□□□□ 0.02
Syn1O88935 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.16■□□□□ 0.02
Syn1O88935 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syn1O88935 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.16■□□□□ 0.02
Syn1O88935 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.16■□□□□ 0.02
Syn1O88935 Gm9257-201ENSMUST00000221254 232 ntBASIC15.16■□□□□ 0.02
Syn1O88935 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Syn1O88935 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.16■□□□□ 0.02
Syn1O88935 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syn1O88935 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Syn1O88935 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Syn1O88935 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syn1O88935 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.16■□□□□ 0.02
Syn1O88935 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syn1O88935 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Syn1O88935 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syn1O88935 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
Syn1O88935 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syn1O88935 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syn1O88935 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syn1O88935 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syn1O88935 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Syn1O88935 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Syn1O88935 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syn1O88935 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Syn1O88935 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.15■□□□□ 0.02
Syn1O88935 Gm13392-201ENSMUST00000117708 150 ntBASIC15.15■□□□□ 0.02
Syn1O88935 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.15■□□□□ 0.02
Syn1O88935 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.15■□□□□ 0.02
Syn1O88935 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Syn1O88935 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.15■□□□□ 0.02
Syn1O88935 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.15■□□□□ 0.02
Syn1O88935 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syn1O88935 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Syn1O88935 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syn1O88935 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.15■□□□□ 0.02
Syn1O88935 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syn1O88935 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syn1O88935 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syn1O88935 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syn1O88935 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syn1O88935 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Syn1O88935 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Syn1O88935 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Syn1O88935 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syn1O88935 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syn1O88935 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syn1O88935 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.14■□□□□ 0.01
Syn1O88935 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syn1O88935 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.14■□□□□ 0.01
Syn1O88935 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.14■□□□□ 0.01
Syn1O88935 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.14■□□□□ 0.01
Syn1O88935 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.14■□□□□ 0.01
Syn1O88935 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syn1O88935 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.14■□□□□ 0.01
Syn1O88935 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Syn1O88935 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.14■□□□□ 0.01
Syn1O88935 Gm21854-201ENSMUST00000179901 471 ntBASIC15.14■□□□□ 0.01
Syn1O88935 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.14■□□□□ 0.01
Syn1O88935 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.14■□□□□ 0.01
Syn1O88935 Gm16476-201ENSMUST00000221544 139 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms