Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lmx1bO88609 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lmx1bO88609 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lmx1bO88609 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lmx1bO88609 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lmx1bO88609 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lmx1bO88609 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lmx1bO88609 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.41□□□□□ -0.26
Lmx1bO88609 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lmx1bO88609 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lmx1bO88609 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lmx1bO88609 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lmx1bO88609 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lmx1bO88609 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.4□□□□□ -0.26
Lmx1bO88609 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lmx1bO88609 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Lmx1bO88609 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.4□□□□□ -0.26
Lmx1bO88609 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Lmx1bO88609 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.4□□□□□ -0.26
Lmx1bO88609 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lmx1bO88609 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.4□□□□□ -0.26
Lmx1bO88609 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lmx1bO88609 Gm18057-201ENSMUST00000208220 503 ntBASIC13.4□□□□□ -0.26
Lmx1bO88609 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.4□□□□□ -0.26
Lmx1bO88609 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.4□□□□□ -0.26
Lmx1bO88609 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.4□□□□□ -0.26
Lmx1bO88609 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lmx1bO88609 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lmx1bO88609 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Lmx1bO88609 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lmx1bO88609 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lmx1bO88609 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lmx1bO88609 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lmx1bO88609 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lmx1bO88609 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Lmx1bO88609 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lmx1bO88609 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.4□□□□□ -0.26
Lmx1bO88609 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lmx1bO88609 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lmx1bO88609 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lmx1bO88609 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lmx1bO88609 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.27
Lmx1bO88609 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Lmx1bO88609 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
Lmx1bO88609 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.39□□□□□ -0.27
Lmx1bO88609 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.39□□□□□ -0.27
Lmx1bO88609 Gm25948-201ENSMUST00000175334 112 ntBASIC13.39□□□□□ -0.27
Lmx1bO88609 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.39□□□□□ -0.27
Lmx1bO88609 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.39□□□□□ -0.27
Lmx1bO88609 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.39□□□□□ -0.27
Lmx1bO88609 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Lmx1bO88609 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.39□□□□□ -0.27
Lmx1bO88609 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.39□□□□□ -0.27
Lmx1bO88609 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.39□□□□□ -0.27
Lmx1bO88609 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Lmx1bO88609 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Lmx1bO88609 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lmx1bO88609 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Lmx1bO88609 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lmx1bO88609 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lmx1bO88609 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lmx1bO88609 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Lmx1bO88609 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lmx1bO88609 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Lmx1bO88609 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lmx1bO88609 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lmx1bO88609 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lmx1bO88609 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lmx1bO88609 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lmx1bO88609 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lmx1bO88609 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lmx1bO88609 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.38□□□□□ -0.27
Lmx1bO88609 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.38□□□□□ -0.27
Lmx1bO88609 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms