Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc22a28B2RT89 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc22a28B2RT89 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc22a28B2RT89 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Slc22a28B2RT89 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.66□□□□□ -0.22
Slc22a28B2RT89 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc22a28B2RT89 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.66□□□□□ -0.22
Slc22a28B2RT89 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc22a28B2RT89 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc22a28B2RT89 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc22a28B2RT89 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc22a28B2RT89 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc22a28B2RT89 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc22a28B2RT89 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Slc22a28B2RT89 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Slc22a28B2RT89 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Slc22a28B2RT89 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Birc2-201ENSMUST00000054878 378 ntBASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc22a28B2RT89 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Gm8749-201ENSMUST00000117737 331 ntBASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Gm7230-201ENSMUST00000173026 815 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms