Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC25.35■■□□□ 1.65
CCDC144AA2RUR9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 GPR89P-201ENST00000407924 1495 ntBASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144AA2RUR9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 IGHV3-65-201ENST00000523210 341 ntBASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 AL353135.1-201ENST00000606729 504 ntBASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC144AA2RUR9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC25.33■■□□□ 1.64
CCDC144AA2RUR9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC144AA2RUR9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC25.32■■□□□ 1.64
CCDC144AA2RUR9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC25.32■■□□□ 1.64
CCDC144AA2RUR9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC25.32■■□□□ 1.64
CCDC144AA2RUR9 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
CCDC144AA2RUR9 YBX2P1-201ENST00000394192 760 ntBASIC25.32■■□□□ 1.64
CCDC144AA2RUR9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC144AA2RUR9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC25.32■■□□□ 1.64
CCDC144AA2RUR9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC25.32■■□□□ 1.64
CCDC144AA2RUR9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC25.32■■□□□ 1.64
CCDC144AA2RUR9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC144AA2RUR9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC144AA2RUR9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC25.32■■□□□ 1.64
CCDC144AA2RUR9 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
CCDC144AA2RUR9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC144AA2RUR9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 GPX1P2-201ENST00000429271 606 ntBASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 AC010327.4-202ENST00000591484 748 ntBASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 AC097637.2-201ENST00000624096 1997 ntBASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144AA2RUR9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC144AA2RUR9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC25.3■■□□□ 1.64
CCDC144AA2RUR9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC25.3■■□□□ 1.64
CCDC144AA2RUR9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
CCDC144AA2RUR9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC144AA2RUR9 HNRNPA1P28-201ENST00000424481 961 ntBASIC25.3■■□□□ 1.64
CCDC144AA2RUR9 AC004832.2-201ENST00000426397 482 ntBASIC25.3■■□□□ 1.64
CCDC144AA2RUR9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC144AA2RUR9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC25.3■■□□□ 1.64
CCDC144AA2RUR9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms