Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 REXO1L11P-201ENST00000620964 1927 ntBASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV5A0A0B4J249 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 AP005242.2-201ENST00000580065 1175 ntBASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 AC008894.3-201ENST00000624324 3103 ntBASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV5A0A0B4J249 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 AC026471.5-201ENST00000615068 467 ntBASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 LINC00167-201ENST00000530583 1419 ntBASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TRAV5A0A0B4J249 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms