Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Gm27867-201ENSMUST00000184778 125 ntBASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40bQ8VHP8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.33□□□□□ -0.27
Rab40bQ8VHP8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rab40bQ8VHP8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rab40bQ8VHP8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Gm10231-201ENSMUST00000181584 441 ntBASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Gm10175-202ENSMUST00000208752 441 ntBASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40bQ8VHP8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Gm13836-201ENSMUST00000121159 501 ntBASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40bQ8VHP8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms