Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 AL138966.2-201ENST00000621997 464 ntBASIC18.15■□□□□ 0.5
CASC4Q6P4E1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CASC4Q6P4E1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
CASC4Q6P4E1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CASC4Q6P4E1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
CASC4Q6P4E1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 AC024563.2-201ENST00000603282 481 ntBASIC18.14■□□□□ 0.49
CASC4Q6P4E1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CASC4Q6P4E1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 AL645608.8-201ENST00000606034 2086 ntBASIC18.13■□□□□ 0.49
CASC4Q6P4E1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.13■□□□□ 0.49
CASC4Q6P4E1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 RASA4DP-201ENST00000460726 1199 ntBASIC18.13■□□□□ 0.49
CASC4Q6P4E1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 AC116407.2-201ENST00000613639 860 ntBASIC18.13■□□□□ 0.49
CASC4Q6P4E1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CASC4Q6P4E1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.12■□□□□ 0.49
CASC4Q6P4E1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CASC4Q6P4E1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CASC4Q6P4E1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CASC4Q6P4E1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CASC4Q6P4E1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CASC4Q6P4E1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CASC4Q6P4E1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CASC4Q6P4E1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CASC4Q6P4E1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CASC4Q6P4E1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.12■□□□□ 0.49
CASC4Q6P4E1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CASC4Q6P4E1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CASC4Q6P4E1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.12■□□□□ 0.49
CASC4Q6P4E1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CASC4Q6P4E1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.12■□□□□ 0.49
CASC4Q6P4E1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CASC4Q6P4E1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms