Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.69■□□□□ 0.42
PHGDHO43175 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHGDHO43175 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHGDHO43175 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHGDHO43175 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHGDHO43175 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PHGDHO43175 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHGDHO43175 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PHGDHO43175 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHGDHO43175 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.69■□□□□ 0.42
PHGDHO43175 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PHGDHO43175 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PHGDHO43175 AC116407.2-201ENST00000613639 860 ntBASIC17.69■□□□□ 0.42
PHGDHO43175 AC004263.2-201ENST00000617183 678 ntBASIC17.69■□□□□ 0.42
PHGDHO43175 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PHGDHO43175 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PHGDHO43175 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHGDHO43175 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.69■□□□□ 0.42
PHGDHO43175 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PHGDHO43175 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
PHGDHO43175 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.69■□□□□ 0.42
PHGDHO43175 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHGDHO43175 AP001094.4-201ENST00000579008 2176 ntBASIC17.69■□□□□ 0.42
PHGDHO43175 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHGDHO43175 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHGDHO43175 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
PHGDHO43175 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHGDHO43175 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PHGDHO43175 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHGDHO43175 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHGDHO43175 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PHGDHO43175 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHGDHO43175 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PHGDHO43175 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PHGDHO43175 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHGDHO43175 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PHGDHO43175 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.68■□□□□ 0.42
PHGDHO43175 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.68■□□□□ 0.42
PHGDHO43175 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHGDHO43175 COX11P1-201ENST00000489116 835 ntBASIC17.68■□□□□ 0.42
PHGDHO43175 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.68■□□□□ 0.42
PHGDHO43175 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.68■□□□□ 0.42
PHGDHO43175 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.68■□□□□ 0.42
PHGDHO43175 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.68■□□□□ 0.42
PHGDHO43175 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHGDHO43175 AC022211.2-201ENST00000585075 2527 ntBASIC17.68■□□□□ 0.42
PHGDHO43175 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHGDHO43175 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PHGDHO43175 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PHGDHO43175 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PHGDHO43175 KRT89P-201ENST00000620027 1478 ntBASIC17.68■□□□□ 0.42
PHGDHO43175 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.68■□□□□ 0.42
PHGDHO43175 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHGDHO43175 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.68■□□□□ 0.42
PHGDHO43175 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.68■□□□□ 0.42
PHGDHO43175 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PHGDHO43175 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PHGDHO43175 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHGDHO43175 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.67■□□□□ 0.42
PHGDHO43175 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PHGDHO43175 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHGDHO43175 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PHGDHO43175 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.67■□□□□ 0.42
PHGDHO43175 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHGDHO43175 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHGDHO43175 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHGDHO43175 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.67■□□□□ 0.42
PHGDHO43175 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHGDHO43175 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PHGDHO43175 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.67■□□□□ 0.42
PHGDHO43175 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.67■□□□□ 0.42
PHGDHO43175 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PHGDHO43175 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHGDHO43175 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHGDHO43175 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PHGDHO43175 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.67■□□□□ 0.42
PHGDHO43175 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHGDHO43175 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PHGDHO43175 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHGDHO43175 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.67■□□□□ 0.42
PHGDHO43175 AC099398.1-201ENST00000567919 2776 ntBASIC17.67■□□□□ 0.42
PHGDHO43175 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHGDHO43175 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHGDHO43175 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHGDHO43175 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PHGDHO43175 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHGDHO43175 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHGDHO43175 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.66■□□□□ 0.42
PHGDHO43175 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHGDHO43175 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.66■□□□□ 0.42
PHGDHO43175 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.66■□□□□ 0.42
PHGDHO43175 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHGDHO43175 AC092597.1-201ENST00000487352 616 ntBASIC17.66■□□□□ 0.42
PHGDHO43175 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHGDHO43175 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.66■□□□□ 0.42
PHGDHO43175 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.66■□□□□ 0.42
PHGDHO43175 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.66■□□□□ 0.42
PHGDHO43175 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.66■□□□□ 0.42
PHGDHO43175 AC139887.4-201ENST00000607877 719 ntBASIC17.66■□□□□ 0.42
PHGDHO43175 AC011558.1-201ENST00000623459 338 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms