Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm8097-201ENSMUST00000117903 829 ntBASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm15372-201ENSMUST00000120729 834 ntBASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm10499-201ENSMUST00000174094 934 ntBASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm6659-201ENSMUST00000174752 547 ntBASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms